Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs4614461 chr11:67473229 C/T 6.67E-6 115 48.1 35.67 23.87 KM Plot
THYM rs4629534 chr4:6294124 G/T 1.6E-6 117 25.83 37.73 50.13 KM Plot
THYM rs4632936 chr6:3268242 G/A 0 118 4.13 44.3 38.33 KM Plot
THYM rs4632937 chr6:3268273 G/A 0 118 4.13 44.3 38.33 KM Plot
THYM rs4634235 chr4:126129200 T/A 0.000107 117 38.33 34.93 42.82 KM Plot
THYM rs463631 chr19:49234692 A/G 2.36E-6 114 11.58 53.27 38.13 KM Plot
THYM rs4640022 chr12:13456826 C/T 1.34E-9 119 44.38 36.92 12.63 KM Plot
THYM rs4653492 chr1:227489222 A/G 0.000154 117 41.7 37.13 19.63 KM Plot
THYM rs4653493 chr1:227489258 A/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs4653494 chr1:227489263 G/A 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs4653809 chr1:227417193 C/T 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs4653816 chr1:227491555 C/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs4653817 chr1:227491812 A/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs467337 chr9:98504175 G/T 2.0E-5 118 32.7 47.93 40.67 KM Plot
THYM rs4688987 chr4:6287329 C/T 2.28E-7 114 27.13 38.83 50.13 KM Plot